STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000079206Uncharacterized protein LOC107706363. (679 aa)    
Predicted Functional Partners:
Fancm
Fanconi anemia group M protein.
    
 0.890
LOC107752938
Glutamic acid-rich protein-like isoform X1.
    
 0.597
ENSSRHP00000033117
Protein lin-52 homolog.
    
 0.528
ENSSRHP00000079599
Lin-52 DREAM MuvB core complex component.
    
 0.528
ENSSRHP00000031995
Protein lin-9 homolog.
    
 0.483
LOC107726751
Protein lin-9 homolog.
    
 0.483
Rpa1
Replication protein A 70 kDa DNA-binding subunit.
    
 0.478
ENSSRHP00000051454
Replication protein A 70 kDa DNA-binding subunit-like.
    
 0.478
ENSSRHP00000010975
annotation not available
    
 0.461
ENSSRHP00000031713
Protein lin-54 homolog.
    
 0.461
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.