STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000082378TIA1 cytotoxic granule-associated RNA binding protein-like 1. (411 aa)    
Predicted Functional Partners:
ENSSRHP00000021629
Cleavage stimulation factor subunit 3.
   
 0.806
ENSSRHP00000090515
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
   
 0.806
ENSSRHP00000008045
Nuclear cap-binding protein subunit 2-like.
  
 
 0.802
LOC107742498
Pre-mRNA 3'-end-processing factor FIP1 isoform X1.
   
 0.784
LOC107714215
Pre-mRNA 3'-end-processing factor FIP1-like isoform X1.
   
 0.784
LOC107743282
Small nuclear ribonucleoprotein E.
   
 0.776
LOC107743282-2
Small nuclear ribonucleoprotein E.
   
 0.776
LOC107710959
Small nuclear ribonucleoprotein Sm D2.
   
 0.771
LOC107710959-2
Small nuclear ribonucleoprotein Sm D2.
   
 0.771
ENSSRHP00000091421
Serine and arginine rich splicing factor 2a.
  
0.771
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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