STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107720771V(D)J recombination-activating protein 2-like. (530 aa)    
Predicted Functional Partners:
LOC107750737
V(D)J recombination-activating protein 1.
  
 0.999
LOC107720765
V(D)J recombination-activating protein 1-like.
  
 0.999
ENSSRHP00000078989
annotation not available
   
 0.975
ENSSRHP00000082065
annotation not available
   
 0.975
ND4
NADH-ubiquinone oxidoreductase chain 4.
      
 0.907
CYTB
Ubiquinol-cytochrome c reductase cytochrome b subunit.
      
 0.907
LOC107750738
V(D)J recombination-activating protein 2.
  
  
 
0.900
LOC107709286
Eukaryotic translation initiation factor 3 subunit I isoform X1.
      
 0.884
ENSSRHP00000016242
Uncharacterized protein LOC107713581.
      
 0.780
LOC107750721
Furin-1-like isoform X1.
   
  
 0.695
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.