STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000083758Serine palmitoyltransferase, small subunit A. (68 aa)    
Predicted Functional Partners:
LOC107720388
Serine palmitoyltransferase 1.
    
 0.920
LOC107715883
Serine palmitoyltransferase 1-like.
    
 0.920
ENSSRHP00000006827
Serine palmitoyltransferase small subunit B.
  
  
0.782
LOC107739864
Serine palmitoyltransferase 3-like isoform X1.
    
 0.773
ENSSRHP00000079971
Serine palmitoyltransferase, long chain base subunit 3.
    
 0.773
LOC107751731
Serine palmitoyltransferase 2-like isoform X1.
    
 0.748
LOC107740573
Serine palmitoyltransferase 2-like.
    
 0.748
LOC107728348
Serine palmitoyltransferase 2-like.
    
 0.737
LOC107739863
Isthmin-1 isoform X1.
    
 0.737
LOC107747949
Serine palmitoyltransferase 2-like isoform X1.
    
 0.737
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.