STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000083774annotation not available (68 aa)    
Predicted Functional Partners:
ENSSRHP00000013542
WD repeat domain 18.
   
 0.675
wdr18
Pre-rRNA-processing protein IPI3.
   
 0.675
LOC107723457
Testis-expressed sequence 10 protein homolog.
   
 0.644
LOC107706105
Testis-expressed sequence 10 protein homolog.
   
 0.644
ENSSRHP00000053676
Pescadillo-like.
   
 0.609
Pes1
Pescadillo homolog isoform X1.
   
 0.609
LOC107735203
Calmodulin-like.
    
 0.600
ENSSRHP00000010854
annotation not available
    
 0.600
ENSSRHP00000010897
Calmodulin-like.
    
 0.600
LOC107708400-3
Calmodulin.
    
 0.600
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.