STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000085717Natterin-like protein. (207 aa)    
Predicted Functional Partners:
LOC107737821
Caspase-1-like.
      
 0.854
LOC107738044
Caspase-1-A-like.
      
 0.854
LOC107713782
Caspase-1-A-like.
      
 0.854
ENSSRHP00000088538
Caspase-1-like.
      
 0.854
ENSSRHP00000029058
Caspase-1-B-like.
      
 0.790
LOC107722930
Toll-like receptor 2 type-2 isoform X1.
      
 0.742
ENSSRHP00000084061
Toll-like receptor 2.
      
 0.742
LOC107758293
Myeloid differentiation primary response protein MyD88-like.
      
 0.711
LOC107741019
Myeloid differentiation primary response protein MyD88.
      
 0.711
ENSSRHP00000027238
Caspase 23, apoptosis-related cysteine peptidase.
      
 0.509
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.