STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000085898Mitogen-activated protein kinase kinase kinase 9-like. (1018 aa)    
Predicted Functional Partners:
tab1
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1.
  
 0.797
LOC107707871
TNF receptor-associated factor 6.
   
 0.694
LOC107730254
TNF receptor-associated factor 6-like.
   
 0.694
Mib2
E3 ubiquitin-protein ligase mind-bomb.
   
 0.651
ENSSRHP00000063330
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.651
LOC107730082
FAS-associated death domain protein-like.
   
 0.647
LOC107727098
FAS-associated death domain protein-like.
   
 0.647
LOC107741433
Tumor necrosis factor receptor type 1-associated DEATH domain protein-like.
   
 0.632
LOC107750529
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
   
 0.632
LOC107708311
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like.
    
 0.611
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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