STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000086051Transcription termination factor 2, mitochondrial-like isoform X1. (447 aa)    
Predicted Functional Partners:
Mrpl20
39S ribosomal protein L20, mitochondrial.
    
 
 0.725
Mrpl36
39S ribosomal protein L36, mitochondrial.
    
 
 0.698
ENSSRHP00000037651
Mitochondrial ribosomal protein L36.
    
 
 0.698
ENSSRHP00000006533
FAST kinase domain-containing protein 2-like.
   
 
 0.683
ENSSRHP00000067973
FAST kinase domains 2.
   
 
 0.683
ENSSRHP00000022888
annotation not available
    
   0.671
rpl23a
Large subunit ribosomal protein L23Ae.
    
   0.671
tefm
Transcription elongation factor, mitochondrial isoform X1.
   
  
 0.653
LOC107713327
Ribosome-recycling factor, mitochondrial-like.
    
 
 0.630
ENSSRHP00000102236
Mitochondrial ribosome recycling factor.
    
 
 0.630
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.