STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000086189Ring finger protein 207a. (570 aa)    
Predicted Functional Partners:
LOC107737527
Polynucleotide 5'-hydroxyl-kinase GRC3/NOL9.
      
 0.510
LOC107716145
Polynucleotide 5'-hydroxyl-kinase GRC3/NOL9.
      
 0.510
LOC107738929
Transcription factor HES-3-like.
    
 
 0.445
ENSSRHP00000011374
Transcription factor HES-4-like isoform X1.
    
 
 0.445
ENSSRHP00000053688
Peptidylprolyl isomerase (cyclophilin)-like 2.
     
 0.430
ppil2
Peptidyl-prolyl cis-trans isomerase-like 2.
     
 0.430
Txndc11
Thioredoxin domain-containing protein 11 isoform X1.
    
 0.415
LOC107720964
E3 ubiquitin-protein ligase rififylin-like isoform X1.
      
 0.406
litaf
Lipopolysaccharide-induced tumor necrosis factor-alpha factor.
      
 0.406
LOC107727125
Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog.
      
 0.406
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
Server load: low (16%) [HD]