STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000087037Pleckstrin homology domain-containing family M member 2-like. (990 aa)    
Predicted Functional Partners:
LOC107741656
Polyubiquitin-C isoform X1.
   
 
 0.948
LOC107752103
Ubiquitin-small subunit ribosomal protein S27Ae.
   
 
 0.831
LOC107752103-2
ubiquitin-40S ribosomal protein S27a.
   
 
 0.831
LOC107718887
26S proteasome non-ATPase regulatory subunit 14.
   
 
 0.724
LOC107718887-2
26S proteasome non-ATPase regulatory subunit 14.
   
 
 0.724
LOC107757047
UV excision repair protein RAD23 homolog A-like.
   
 
 0.715
ENSSRHP00000038478
annotation not available
   
 
 0.715
LOC107747426
UV excision repair protein RAD23 homolog A-like.
   
 
 0.715
LOC107717165
UV excision repair protein RAD23 homolog B-like.
   
 
 0.715
ENSSRHP00000062490
UV excision repair protein RAD23 homolog B-like.
   
 
 0.715
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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