STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000087924Isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma. (318 aa)    
Predicted Functional Partners:
LOC107757767
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial isoform X1.
  
0.988
LOC107752321
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial-like.
  
0.988
LOC107734200
Aconitate hydratase, mitochondrial-like.
  
 0.881
LOC107731401
Aconitate hydratase, mitochondrial-like.
  
 0.881
ENSSRHP00000003848
3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic-like.
  
 0.870
LOC107715992
Hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1.
  
 0.870
LOC107721118
Hydroxymethylglutaryl-CoA lyase, mitochondrial-like.
  
 0.870
hmgcll1
3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1.
  
 0.870
LOC107748457
ATP synthase subunit gamma, mitochondrial-like isoform X1.
  
 
 0.784
ENSSRHP00000040529
ATP synthase F1 subunit gamma.
  
 
 0.784
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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