ENSSRHP00000088013 protein (Sinocyclocheilus rhinocerous)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSRHP00000088013

Kinesin-like protein KIF26B. (1422 aa)

Predicted Functional Partners:

ENSSRHP00000014352

0.751

ENSSRHP00000030460

0.751

ENSSRHP00000035931

0.751

ENSSRHP00000060463

0.751

ENSSRHP00000004181

0.676

LOC107731216

0.659

LOC107749572

0.641

ENSSRHP00000011806

0.620

LOC107716776

0.611

LOC107736548

0.608

Your Current Organism:

Sinocyclocheilus rhinocerous

NCBI taxonomy Id: 307959
Other names: S. rhinocerous

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSRHP00000004181	ENSSRHP00000088013	ENSSRHP00000004181	ENSSRHP00000088013	Olfactory receptor 1D2-like.	Kinesin-like protein KIF26B.	0.676
ENSSRHP00000004181	LOC107716776	ENSSRHP00000004181	ENSSRHP00000060994	Olfactory receptor 1D2-like.	Augurin-A-like.	0.611
ENSSRHP00000011806	ENSSRHP00000014352	ENSSRHP00000011806	ENSSRHP00000014352	Intraflagellar transport 80 homolog (Chlamydomonas).	Kinesin-associated protein 3-like.	0.825
ENSSRHP00000011806	ENSSRHP00000030460	ENSSRHP00000011806	ENSSRHP00000030460	Intraflagellar transport 80 homolog (Chlamydomonas).	Kinesin-associated protein 3b.	0.825
ENSSRHP00000011806	ENSSRHP00000035931	ENSSRHP00000011806	ENSSRHP00000035931	Intraflagellar transport 80 homolog (Chlamydomonas).	Kinesin-associated protein 3-like.	0.825
ENSSRHP00000011806	ENSSRHP00000060463	ENSSRHP00000011806	ENSSRHP00000060463	Intraflagellar transport 80 homolog (Chlamydomonas).	Kinesin-associated protein 3-like.	0.825
ENSSRHP00000011806	ENSSRHP00000088013	ENSSRHP00000011806	ENSSRHP00000088013	Intraflagellar transport 80 homolog (Chlamydomonas).	Kinesin-like protein KIF26B.	0.620
ENSSRHP00000014352	ENSSRHP00000011806	ENSSRHP00000014352	ENSSRHP00000011806	Kinesin-associated protein 3-like.	Intraflagellar transport 80 homolog (Chlamydomonas).	0.825
ENSSRHP00000014352	ENSSRHP00000088013	ENSSRHP00000014352	ENSSRHP00000088013	Kinesin-associated protein 3-like.	Kinesin-like protein KIF26B.	0.751
ENSSRHP00000030460	ENSSRHP00000011806	ENSSRHP00000030460	ENSSRHP00000011806	Kinesin-associated protein 3b.	Intraflagellar transport 80 homolog (Chlamydomonas).	0.825
ENSSRHP00000030460	ENSSRHP00000088013	ENSSRHP00000030460	ENSSRHP00000088013	Kinesin-associated protein 3b.	Kinesin-like protein KIF26B.	0.751
ENSSRHP00000035931	ENSSRHP00000011806	ENSSRHP00000035931	ENSSRHP00000011806	Kinesin-associated protein 3-like.	Intraflagellar transport 80 homolog (Chlamydomonas).	0.825
ENSSRHP00000035931	ENSSRHP00000088013	ENSSRHP00000035931	ENSSRHP00000088013	Kinesin-associated protein 3-like.	Kinesin-like protein KIF26B.	0.751
ENSSRHP00000060463	ENSSRHP00000011806	ENSSRHP00000060463	ENSSRHP00000011806	Kinesin-associated protein 3-like.	Intraflagellar transport 80 homolog (Chlamydomonas).	0.825
ENSSRHP00000060463	ENSSRHP00000088013	ENSSRHP00000060463	ENSSRHP00000088013	Kinesin-associated protein 3-like.	Kinesin-like protein KIF26B.	0.751
ENSSRHP00000088013	ENSSRHP00000004181	ENSSRHP00000088013	ENSSRHP00000004181	Kinesin-like protein KIF26B.	Olfactory receptor 1D2-like.	0.676
ENSSRHP00000088013	ENSSRHP00000011806	ENSSRHP00000088013	ENSSRHP00000011806	Kinesin-like protein KIF26B.	Intraflagellar transport 80 homolog (Chlamydomonas).	0.620
ENSSRHP00000088013	ENSSRHP00000014352	ENSSRHP00000088013	ENSSRHP00000014352	Kinesin-like protein KIF26B.	Kinesin-associated protein 3-like.	0.751
ENSSRHP00000088013	ENSSRHP00000030460	ENSSRHP00000088013	ENSSRHP00000030460	Kinesin-like protein KIF26B.	Kinesin-associated protein 3b.	0.751
ENSSRHP00000088013	ENSSRHP00000035931	ENSSRHP00000088013	ENSSRHP00000035931	Kinesin-like protein KIF26B.	Kinesin-associated protein 3-like.	0.751