STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107732696Protein transport protein Sec24D-like isoform X1. (1033 aa)    
Predicted Functional Partners:
LOC107720356
Protein transport protein SEC13.
   
 0.996
LOC107719942
Protein transport protein SEC13.
   
 0.996
ENSSRHP00000062689
annotation not available
   
 0.977
ENSSRHP00000089380
annotation not available
   
 0.977
ENSSRHP00000059633
Protein transport protein Sec23A-like.
   
 0.962
LOC107752097
Protein transport protein Sec23A.
   
 0.962
LOC107729285
Protein transport protein Sec23A.
   
 0.954
LOC107733904
Protein transport protein Sec23A-like.
   
 0.954
ENSSRHP00000073379
annotation not available
   
 0.934
LOC107731363
Protein transport protein Sec24B-like isoform X1.
   
0.928
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.