STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC134Coiled-coil domain-containing protein 134. (228 aa)    
Predicted Functional Partners:
ENSSRHP00000054055
annotation not available
      
 0.657
LOC107750992
Amyloid beta A4 precursor protein-binding family A member 3-like isoform X1.
      
 0.609
LOC107752160
Amyloid beta A4 precursor protein-binding family A member 3-like isoform X1.
      
 0.609
LOC107706766
Transmembrane emp24 domain-containing protein 2.
   
 
 0.533
LOC107712090
Transmembrane emp24 domain-containing protein 2-like.
   
 
 0.533
haus8
HAUS augmin-like complex subunit 8 isoform X1.
      
 0.519
LOC107713297
Eosinophil peroxidase-like.
      
 0.510
zbtb20
Zinc finger and BTB domain-containing protein 20.
    
 0.458
LOC107752247
Zinc finger and BTB domain-containing protein 20-like.
    
 0.458
LOC107716639
Caveolin-2-like.
    
 0.445
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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