STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000092724Rhophilin-2. (693 aa)    
Predicted Functional Partners:
ENSSRHP00000016035
annotation not available
    
 0.634
Mdp1
LOW QUALITY PROTEIN: magnesium-dependent phosphatase 1.
    
 0.634
LOC107735471
Charged multivesicular body protein 4c-like.
   
 0.587
LOC107748316
Charged multivesicular body protein 4c-like.
   
 0.587
LOC107754198
Transmembrane 9 superfamily member 1-like.
   
 0.587
LOC107733052
Charged multivesicular body protein 4b-like.
   
 0.587
ENSSRHP00000036162
annotation not available
   
 0.587
ENSSRHP00000036163
annotation not available
   
 0.587
LOC107724563
Charged multivesicular body protein 4c-like isoform X1.
   
 0.587
ENSSRHP00000052280
Charged multivesicular body protein 4b-like.
   
 0.587
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.