STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107740551Protein-lysine 6-oxidase-like. (447 aa)    
Predicted Functional Partners:
LOC107724235
Fibulin-5-like.
   
 0.634
LOC107705389
Fibulin-5-like isoform X1.
   
 0.634
ENSSRHP00000072534
annotation not available
   
 0.631
ENSSRHP00000085175
Metallothionein 2.
      
 0.576
ENSSRHP00000090572
RING finger protein 223-like.
   
 0.456
ENSSRHP00000025763
Microfibril associated protein 5.
   
 
 0.448
LOC107744296
Microfibrillar-associated protein 2-like isoform X1.
   
 
 0.448
ENSSRHP00000020889
Ribonuclease 3-like.
    
 
 0.443
ENSSRHP00000066395
Ribonuclease 3-like.
    
 
 0.443
Arid4b
AT-rich interactive domain-containing protein 4B.
    
 0.441
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.