STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASCC3Activating signal cointegrator 1 complex subunit 3-like. (1333 aa)    
Predicted Functional Partners:
LOC107743637
Pre-mRNA-processing-splicing factor 8.
   
 0.965
ENSSRHP00000056853
pre-mRNA processing factor 8.
   
 0.965
ENSSRHP00000019913
Activating signal cointegrator 1 complex subunit 2-like.
    
 0.961
LOC107741258
Activating signal cointegrator 1 complex subunit 2-like.
    
 0.961
PRPF6
LOW QUALITY PROTEIN: pre-mRNA-processing factor 6-like.
   
 0.944
ENSSRHP00000059240
Pre-mRNA-processing factor 6 isoform X1.
   
 0.944
Ascc1
Activating signal cointegrator 1 complex subunit 1 isoform X1.
    
 0.940
Sf3b3
Splicing factor 3B subunit 3 isoform X1.
   
 
 0.936
LOC107756482
Pre-mRNA-processing factor SLU7.
    
 
 0.919
sf3a1
Splicing factor 3A subunit 1.
   
 
 0.910
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.