STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107730398Glypican-6-like isoform X1. (553 aa)    
Predicted Functional Partners:
LOC107748562
Syndecan-2-A-like.
    
 0.718
LOC107751894
Syndecan-2-A-like.
    
 0.718
LOC107754691
Exostosin-2-like.
     
 0.616
ENSSRHP00000100959
Glucuronyl/N-acetylglucosaminyl transferase EXT2.
     
 0.616
ENSSRHP00000001463
Notum, palmitoleoyl-protein carboxylesterase a.
    
 0.604
LOC107705526
O-palmitoleoyl-L-serine hydrolase.
    
 0.604
ENSSRHP00000034879
Palmitoleoyl-protein carboxylesterase notum1a-like.
    
 0.604
ENSSRHP00000085728
Palmitoleoyl-protein carboxylesterase notum1a.
    
 0.604
ENSSRHP00000094708
O-palmitoleoyl-L-serine hydrolase.
    
 0.604
LOC107717396
Xylosylprotein 4-beta-galactosyltransferase.
     
 0.581
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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