STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000093575Transmembrane protein 150Aa. (275 aa)    
Predicted Functional Partners:
LOC107714339
E3 ubiquitin-protein ligase RNF144B-like.
      
 0.515
ENSSRHP00000021025
Tetratricopeptide repeat domain 7A.
      
 0.511
ENSSRHP00000035882
Tetratricopeptide repeat domain 7A.
      
 0.511
ENSSRHP00000025051
Family with sequence similarity 126 member A.
      
 0.405
ENSSRHP00000040606
annotation not available
      
 0.405
ENSSRHP00000080973
Tetratricopeptide repeat domain 7B.
      
 0.402
ENSSRHP00000101231
Tetratricopeptide repeat domain 7B.
      
 0.402
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.