STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107706438Homeobox protein Nkx-6.1-like. (317 aa)    
Predicted Functional Partners:
LOC107734121
Insulin.
      
 0.618
LOC107726936
Neurogenic differentiation factor 2-like.
   
  
 0.615
LOC107743583
Neurogenin-2-like.
   
  
 0.615
ENSSRHP00000032227
Paired box 4.
    
 
 0.608
ENSSRHP00000086545
Paired box 4.
    
 
 0.608
LOC107719825
Class B basic helix-loop-helix protein 1/6/7.
   
  
 0.541
LOC107731746
Class B basic helix-loop-helix protein 1/6/7.
   
  
 0.541
LOC107751373
Pancreas transcription factor 1 subunit alpha-like.
      
 0.537
LOC107732570
Pancreas transcription factor 1 subunit alpha.
      
 0.537
LOC107716998
Neurogenic differentiation factor 1-like.
   
  
 0.532
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.