STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000099428Mitochondrial translational release factor 1. (265 aa)    
Predicted Functional Partners:
Mrpl20
39S ribosomal protein L20, mitochondrial.
  
 
 0.931
N6AMT1
HemK methyltransferase family member 2-like.
  
 
 0.919
LOC107751077
hemK methyltransferase family member 2-like.
  
 
 0.919
LOC107750260
HemK methyltransferase family member 1-like isoform X1.
  
 
 0.892
ENSSRHP00000045951
HemK methyltransferase family member 1.
  
 
 0.892
mrpl58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
   
 
 0.889
LOC107733956
28S ribosomal protein S11, mitochondrial-like isoform X1.
 
 
 0.864
LOC107749690
28S ribosomal protein S11, mitochondrial-like.
 
 
 0.863
ENSSRHP00000055800
annotation not available
  
  
 0.861
ENSSRHP00000069287
glutamyl-prolyl-tRNA synthetase 1.
  
  
 0.861
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.