STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000100775Queuine tRNA-ribosyltransferase 1. (275 aa)    
Predicted Functional Partners:
LOC107754954
Queuine tRNA-ribosyltransferase subunit qtrtd1 isoform X1.
  
0.982
LOC107733214
Queuine tRNA-ribosyltransferase subunit qtrtd1-like isoform X1.
  
0.982
LOC107755443
Probable tRNA pseudouridine synthase 1.
  
  
 0.725
mettl1
TRNA (guanine-N(7)-)-methyltransferase.
  
  
 0.694
ENSSRHP00000023998
UPF0553 protein C9orf64 homolog.
 
   
 0.656
LOC107757431
UPF0553 protein C9orf64 homolog.
 
   
 0.647
ENSSRHP00000078403
GTP binding protein 3, mitochondrial.
   
  
 0.644
PTS
6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase.
    
 0.623
ENSSRHP00000039775
6-pyruvoyltetrahydropterin synthase.
    
 0.623
COX1
Cytochrome c oxidase subunit 1.
      
 0.611
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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