STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107733309Ezrin-like isoform X1. (591 aa)    
Predicted Functional Partners:
Slc9a1
Solute carrier family 9 (sodium/hydrogen exchanger), member 1.
    
 0.916
LOC107722944
Actin, cytoplasmic 1.
   
 0.915
LOC107722225
Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like.
    
 0.870
LOC107755498
Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like.
    
 0.870
ENSSRHP00000051854
CD44 antigen-like.
   
 
 0.833
LOC107743012
Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like isoform X1.
    
 0.817
LOC107727364
Novel protein kinase C epsilon type.
   
 
  0.776
LOC107739250
Novel protein kinase C epsilon type.
   
 
  0.776
ENSSRHP00000086370
Novel protein kinase C epsilon type.
   
 
  0.776
LOC107746233
Moesin-like.
  
   
0.677
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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