STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107721343Leukocyte elastase inhibitor-like isoform X1. (395 aa)    
Predicted Functional Partners:
LOC107742559
Coagulation factor II (thrombin).
   
 0.736
ENSSRHP00000071505
Coagulation factor II (thrombin).
   
 0.736
ENSSRHP00000070270
annotation not available
  
  0.530
LOC107731971
Vitronectin-like.
   
 0.523
ENSSRHP00000044985
Vitronectin a.
   
 0.523
ENSSRHP00000056878
Vitronectin a.
   
 0.523
ENSSRHP00000087049
Vitronectin b.
   
 0.523
LOC107758872
Fibrinogen alpha chain-like.
   
 0.476
LOC107714149
Fibrinogen alpha chain-like.
   
 0.476
LOC107713040
Clustered mitochondria protein homolog.
   
  
 0.446
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.