STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000101649Integrin alpha-V-like. (863 aa)    
Predicted Functional Partners:
LOC107725247
Integrin beta-5-like isoform X1.
   
 0.976
ENSSRHP00000067901
Integrin beta-5-like.
   
 0.976
ENSSRHP00000069655
Integrin beta-3-like.
   
 0.973
LOC107754700
Integrin beta-3-like isoform X1.
   
 0.971
Itgb8
Integrin beta-8 isoform X1.
    
 0.968
ENSSRHP00000050948
Integrin beta-6-like.
   
 0.967
ITGB6
Integrin beta-6-like.
   
 0.967
LOC107750053
Fibronectin-like isoform X1.
    
 0.966
LOC107749885
Fibronectin-like isoform X1.
    
 0.966
LOC107731971
Vitronectin-like.
   
 0.953
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.