STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107725982Transcription factor EC-like isoform X1. (437 aa)    
Predicted Functional Partners:
irf4
Interferon regulatory factor 4.
   
 
 0.743
ENSSRHP00000035381
Interferon regulatory factor 4a.
   
 
 0.743
LOC107743632
Uncharacterized protein LOC107743632.
      
 0.741
LOC107725965
Uncharacterized protein LOC107725965.
      
 0.741
ENSSRHP00000008197
Mast/stem cell growth factor receptor kita-like.
   
  
 0.737
ENSSRHP00000031133
Mast/stem cell growth factor receptor kita-like isoform X1.
   
  
 0.737
Runx1
Runt-related transcription factor 1 isoform X1.
      
 0.728
ENSSRHP00000083315
RUNX family transcription factor 1.
      
 0.728
LOC107730785
C-C chemokine receptor type 9-like.
     
 0.720
LOC107733890
C-C chemokine receptor type 9-like.
     
 0.720
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.