STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107757546Calpain small subunit 1-like. (232 aa)    
Predicted Functional Partners:
ENSSRHP00000037978
Calpastatin-like isoform X1.
   
 0.796
ENSSRHP00000078464
Calpastatin-like isoform X1.
   
 0.796
LOC107755679
Calpain-7-like.
   
 0.786
LOC107705521
Calpain-7-like.
   
 0.786
ENSSRHP00000006114
Calpain-15-like.
   
 0.741
ENSSRHP00000044632
Calpain-15-like.
   
 0.741
ENSSRHP00000068231
Calpain 10.
   
 0.694
ENSSRHP00000096583
Calpain-10-like.
   
 0.694
ENSSRHP00000004956
Calpain 5a.
   
 0.663
LOC107713096
Calpain-5-like.
   
 0.663
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.