STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_30010Putative exosome component 10. (544 aa)    
Predicted Functional Partners:
BSL78_07538
Putative U3 small nucleolar RNA-associated protein 14-like A.
   
  0.995
BSL78_24921
Uncharacterized protein.
   
 0.994
BSL78_15563
Putative exosome complex component RRP43.
   
 0.994
BSL78_09764
Putative superkiller viralicidic activity 2-like 2 isoform X1.
   
 0.994
BSL78_06516
Putative exosome complex component CSL4-like.
   
 0.994
BSL78_04832
Putative exosome complex component RRP40-like.
   
 0.994
BSL78_14702
Nuclear nucleic acid-binding protein C1D.
   
 0.993
BSL78_13426
Putative U3 small nucleolar RNA-associated protein 18-like.
   
 0.993
BSL78_13772
Putative nucleolar protein 56.
   
 0.992
BSL78_01135
Putative WD repeat-containing protein 36.
   
  0.992
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.