STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_29606Putative peptide methionine sulfoxide reductase-like. (132 aa)    
Predicted Functional Partners:
BSL78_22577
Uncharacterized protein; Belongs to the NDK family.
  
 0.934
BSL78_29996
Putative thioredoxin-like.
  
 0.927
BSL78_24942
Thioredoxin; Belongs to the thioredoxin family.
  
 0.927
BSL78_24759
Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.
 
 
 0.886
BSL78_20863
Thioredoxin domain-containing protein.
  
 0.870
BSL78_16163
Thioredoxin; Belongs to the thioredoxin family.
   
 0.834
BSL78_07065
Thioredoxin.
   
 0.834
BSL78_07064
Thioredoxin domain-containing protein.
   
 0.834
BSL78_28747
Putative dnaJ-like subfamily C member 10.
   
 0.812
BSL78_28746
Putative dnaJ-like subfamily C member 10.
   
 0.812
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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