STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_28224Putative cholinesterase 1 isoform X1. (135 aa)    
Predicted Functional Partners:
BSL78_23554
Putative cytochrome b5 reductase 4-like isoform X3.
    
 0.714
BSL78_10906
Putative peripheral plasma membrane protein CASK isoform X8.
    
  0.591
BSL78_10907
Putative peripheral plasma membrane protein CASK-like isoform X3.
    
  0.591
BSL78_11873
Putative sulfite oxidase.
    
  0.585
BSL78_24453
Putative isoamyl acetate-hydrolyzing esterase 1-like.
   
 0.535
BSL78_22185
Putative beta-glucuronidase.
    
 0.519
BSL78_12993
Putative nucleolar complex protein 4-like.
    
  0.515
BSL78_10836
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.515
BSL78_10611
Putative rRNA-processing protein FCF1-like.
    
  0.515
BSL78_20159
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
 0.514
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.