STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_27928Membrane progestin receptor gamma-B. (266 aa)    
Predicted Functional Partners:
BSL78_30059
Putative DCC-interacting protein 13-alpha.
    
 0.950
BSL78_26909
Putative low density lipoprotein receptor adapter protein 1.
    
 0.644
BSL78_02390
Putative PTB domain-containing engulfment adapter protein 1-like isoform X5.
    
 0.644
BSL78_01804
Putative low density lipoprotein receptor adapter protein 1 isoform X1.
    
 0.644
BSL78_23955
Putative arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X4.
    
 0.613
BSL78_23956
Putative arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X8.
    
 0.613
BSL78_09046
Uncharacterized protein.
    
 0.613
BSL78_06038
Putative arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X7.
    
 0.613
BSL78_06037
Putative arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X8.
    
 0.613
BSL78_22973
Putative serine/threonine-protein kinase B-raf.
    
  0.534
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.