STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_26521Putative thyroid adenoma-associated protein-like isoform X1. (1842 aa)    
Predicted Functional Partners:
BSL78_30260
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
 
 0.797
BSL78_07730
FtsJ domain-containing protein.
   
 
 0.797
BSL78_10226
Replication protein A2, 32kDa.
    
   0.544
BSL78_12199
Putative pre-rRNA processing protein FTSJ3.
   
 
 0.515
BSL78_12198
Putative pre-rRNA processing protein FTSJ3.
   
 
 0.515
BSL78_28740
Putative rRNA methyltransferase 2, mitochondrial.
   
 
 0.495
BSL78_12511
Putative ribosomal RNA methyltransferase 2-like.
   
 
 0.495
BSL78_12512
Putative rRNA methyltransferase 2, mitochondrial.
   
 
 0.495
BSL78_04435
Putative WD repeat-containing protein 6-like.
   
 
 0.436
BSL78_04434
Putative WD repeat-containing protein 6-like isoform X2.
   
 
 0.436
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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