STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_25842Complement component 3-2. (596 aa)    
Predicted Functional Partners:
BSL78_12952
PID domain-containing protein.
    
 0.627
BSL78_03304
Uncharacterized protein.
    
 0.627
BSL78_05285
K Chain K, Ring1b C-Terminal DomainRYBP C-Terminal Domain Complex.
    
 0.620
BSL78_05286
Putative E3 ubiquitin-protein ligase RING2-A.
    
 0.620
BSL78_25981
Chromo domain-containing protein.
    
 0.539
BSL78_17030
Putative myoneurin.
    
 0.539
BSL78_01365
Putative myoneurin.
    
 0.539
BSL78_30045
Putative polycomb protein eed-A.
    
 0.495
BSL78_15143
Putative polycomb protein eed-A.
    
 0.495
BSL78_13771
Polycomb group RING finger protein 3.
    
  0.473
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.