STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_25666Uncharacterized protein. (445 aa)    
Predicted Functional Partners:
BSL78_08629
Mon2_C domain-containing protein.
 
     0.936
BSL78_06100
Dopey_N domain-containing protein.
   
 
 0.815
BSL78_06099
Uncharacterized protein.
   
 
 0.815
BSL78_06098
Uncharacterized protein.
   
 
 0.815
BSL78_09776
RIC1 domain-containing protein.
   
 
 0.589
BSL78_05284
Putative vacuolar protein sorting-associated protein 26B-like.
 
 
 
 0.565
BSL78_20124
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
 
 0.522
BSL78_09826
Putative coiled-coil domain-containing protein.
   
 
 0.522
BSL78_06503
Putative ADP-ribosylation factor-like protein 3 variant 1; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.456
BSL78_29220
Putative ADP-ribosylation factor-related protein 1-like isoform X1.
    
 
 0.436
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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