STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_24584Protein kinase; Belongs to the protein kinase superfamily. (480 aa)    
Predicted Functional Partners:
BSL78_28283
Uncharacterized protein.
    
 0.870
BSL78_09449
Putative bystin-like.
    
 0.844
BSL78_03184
Uncharacterized protein.
    
 0.840
BSL78_03183
Uncharacterized protein.
    
 0.840
BSL78_10816
RIO kinase 2.
    
 0.836
BSL78_18390
Glycogen synthase kinase-3 beta isoform 1; Belongs to the protein kinase superfamily.
    
 0.731
BSL78_23574
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.710
BSL78_13684
Dishevelled.
    
 0.689
BSL78_07938
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.688
BSL78_13089
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.669
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.