STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_24105Uncharacterized protein. (368 aa)    
Predicted Functional Partners:
BSL78_22770
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.968
BSL78_08622
Putative IQ motif and SEC7 domain-containing protein 1.
    
0.828
BSL78_19075
Putative E3 ubiquitin-protein ligase TRIM23 isoform X1.
   
 0.808
BSL78_19076
Putative E3 ubiquitin-protein ligase TRIM23 isoform X1.
   
 0.808
BSL78_18681
Putative PH and SEC7 domain-containing protein 3 isoform X2.
     
 0.788
BSL78_18680
Putative PH and SEC7 domain-containing protein 3-like.
     
0.788
BSL78_15902
Putative ADP-ribosylation factor-like protein 4C-like.
    
 0.787
BSL78_28496
Putative ADP-ribosylation factor 1-like; Belongs to the small GTPase superfamily. Arf family.
    
 0.778
BSL78_07851
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.778
BSL78_06404
Arf1; Belongs to the small GTPase superfamily. Arf family.
    
 0.778
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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