STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_24026Putative cysteine desulfurase, mitochondrial. (300 aa)    
Predicted Functional Partners:
BSL78_19440
Putative frataxin, mitochondrial.
   
 0.999
BSL78_12792
Putative LYR motif-containing protein 4 isoform X2; Belongs to the complex I LYR family.
   
 0.999
BSL78_06081
NifU-like protein.
 
 0.999
BSL78_01198
Putative NFU1 iron-sulfur cluster scaffold-like, mitochondrial.
  
 0.958
BSL78_29032
2Fe-2S ferredoxin-type domain-containing protein.
 
 0.956
BSL78_22229
Putative adrenodoxin-like protein, mitochondrial-like.
 
 0.951
BSL78_08358
Putative adenylyltransferase and sulfurtransferase MOCS3-like.
   
 0.891
BSL78_08359
Putative adenylyltransferase and sulfurtransferase MOCS3-like.
   
 0.891
BSL78_01570
Putative adenylyltransferase and sulfurtransferase MOCS3-like isoform X1.
   
 0.891
BSL78_01334
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.888
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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