STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_23482Putative nuclear factor interleukin-3-regulated protein-like. (445 aa)    
Predicted Functional Partners:
BSL78_17682
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.918
BSL78_13458
Putative cytochrome c oxidase subunit 4 isoform 1, mitochondrial.
   
 0.905
BSL78_11346
Putative cytochrome c oxidase subunit 6A, mitochondrial; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.901
BSL78_03118
Putative cytochrome c oxidase subunit 5B, mitochondrial.
   
 0.881
BSL78_00749
DUF4706 domain-containing protein.
   
 0.881
BSL78_30278
Hlf.
    
 
0.803
BSL78_22157
BZIP domain-containing protein.
    
 
0.803
BSL78_13846
BZIP domain-containing protein.
   
 0.802
BSL78_28283
Uncharacterized protein.
   
 0.788
BSL78_01194
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.760
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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