STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_21602Putative zinc finger C3H1 domain-containing protein isoform X1. (1119 aa)    
Predicted Functional Partners:
BSL78_09764
Putative superkiller viralicidic activity 2-like 2 isoform X1.
    
 
 0.968
BSL78_02935
Putative poly(A) polymerase gamma.
   
 
 0.965
BSL78_09786
Putative YTH domain-containing family protein 3.
    
 
 0.862
BSL78_22659
Putative helicase SKI2W-like.
    
 
 0.691
BSL78_22660
Putative helicase SKI2W.
    
 
 0.691
BSL78_15296
Putative importin-7.
    
 
 0.691
BSL78_15297
Putative importin-7 isoform X2.
    
 
 0.691
BSL78_10809
Putative importin-7 isoform X2.
    
 
 0.691
BSL78_06612
Putative helicase SKI2W.
    
 
 0.691
BSL78_06611
Putative helicase SKI2W-like.
    
 
 0.691
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.