STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_20400Putative hepatocyte growth factor receptor. (384 aa)    
Predicted Functional Partners:
BSL78_05433
Putative E3 ubiquitin ligase.
    
 0.998
BSL78_15609
Uncharacterized protein.
   
 0.977
BSL78_24772
Putative growth factor receptor-bound protein 2-like.
    
 0.973
BSL78_07364
Putative growth factor receptor-bound protein 2.
    
 0.973
BSL78_03810
Putative endophilin-A2-like.
    
 0.960
BSL78_11644
Uncharacterized protein.
 
 
 0.934
BSL78_22770
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
   
  0.932
BSL78_29921
Epidermal growth factor receptor.
   
 0.923
BSL78_11645
Epidermal growth factor receptor.
   
 0.923
BSL78_09277
Receptor protein-tyrosine kinase.
   
0.923
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.