STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_20277Putative stearoyl-CoA desaturase 5 isoform X1; Belongs to the fatty acid desaturase type 1 family. (325 aa)    
Predicted Functional Partners:
BSL78_23554
Putative cytochrome b5 reductase 4-like isoform X3.
    
 0.792
BSL78_21225
Putative cytochrome b5; Belongs to the cytochrome b5 family.
    
 0.731
BSL78_24467
Elongation of very long chain fatty acids protein.
   
 0.730
BSL78_07227
Putative cytochrome b5 domain-containing protein 1-like; Belongs to the cytochrome b5 family.
    
 0.707
BSL78_28893
Putative fatty acid desaturase 2-like isoform X1.
  
 0.675
BSL78_07089
Putative fatty acid desaturase 2-like isoform X1.
  
 0.675
BSL78_13100
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
     
 0.673
BSL78_29017
Putative inactive hydroxysteroid dehydrogenase-like protein 1.
   
 0.662
BSL78_07784
Putative inactive hydroxysteroid dehydrogenase-like protein 1.
   
 0.662
BSL78_00675
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.662
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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