STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_19420Uncharacterized protein. (73 aa)    
Predicted Functional Partners:
BSL78_03935
Runt protein.
    
 0.990
BSL78_00291
Putative runt-related transcription factor isoform X1.
    
 0.990
BSL78_06088
Putative cullin-5; Belongs to the cullin family.
    
 
 0.979
BSL78_18091
Putative transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 
 0.978
BSL78_13458
Putative cytochrome c oxidase subunit 4 isoform 1, mitochondrial.
    
 
 0.951
BSL78_24816
Putative transcription elongation factor B polypeptide 2.
    
 
 0.936
BSL78_11280
Putative transcription elongation factor B polypeptide 2-like.
    
 
 0.936
BSL78_25230
Putative homeodomain-interacting protein kinase 2-like; Belongs to the protein kinase superfamily.
     
 0.935
BSL78_05767
LIM domain only protein.
    
 0.832
BSL78_17966
Putative T-cell acute lymphocytic leukemia protein 1 isoform X1.
     
 0.799
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.