STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_19127Putative low-density lipoprotein receptor-related protein 2. (215 aa)    
Predicted Functional Partners:
BSL78_22809
Dickkopf-1.
    
 0.787
BSL78_02644
Putative alpha-2-macroglobulin receptor-associated protein.
    
 0.665
BSL78_13684
Dishevelled.
    
 0.650
BSL78_12952
PID domain-containing protein.
    
 0.648
BSL78_01804
Putative low density lipoprotein receptor adapter protein 1 isoform X1.
    
  0.644
BSL78_22428
Putative dual specificity protein phosphatase 3.
    
 0.638
BSL78_13625
Putative atrial natriuretic peptide-converting enzyme-like.
    
 0.622
BSL78_05995
Putative enteropeptidase-like; Belongs to the peptidase S1 family.
    
 0.622
BSL78_05910
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 0.613
BSL78_07750
Putative E3 ubiquitin-protein ligase MYLIP.
    
  0.608
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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