STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_18658Putative vacuolar protein sorting-associated protein 37B isoform X2. (247 aa)    
Predicted Functional Partners:
BSL78_12633
Uncharacterized protein.
    
 0.998
BSL78_00997
Putative multivesicular body subunit 12B.
   
 0.997
BSL78_10030
Putative vacuolar protein-sorting-associated protein 25.
    
 0.960
BSL78_07753
Charged multivesicular body protein 2a.
    
 0.920
BSL78_12603
Uncharacterized protein.
     
 0.910
BSL78_05300
Putative vacuolar protein sorting-associated protein 37A.
     
 0.903
BSL78_29790
Putative charged multivesicular body protein 3 isoform X3.
     
 0.894
BSL78_13961
Putative hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 0.886
BSL78_23838
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
     
 0.879
BSL78_13707
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
     
 0.879
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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