STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_18647Uncharacterized protein. (215 aa)    
Predicted Functional Partners:
BSL78_19359
Uncharacterized protein.
  
     0.515
BSL78_04780
Uncharacterized protein.
  
     0.508
BSL78_03113
Uncharacterized protein.
  
     0.503
BSL78_01449
Uncharacterized protein.
  
     0.500
BSL78_05589
Uncharacterized protein.
  
     0.494
BSL78_26394
Uncharacterized protein.
  
     0.493
BSL78_19358
Uncharacterized protein.
  
     0.476
BSL78_22710
Uncharacterized protein.
  
     0.411
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.