STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_18465Putative YLP motif-containing protein 1. (1307 aa)    
Predicted Functional Partners:
BSL78_06152
Putative rab5 GDP/GTP exchange factor isoform X7.
   
 
  0.722
BSL78_10611
Putative rRNA-processing protein FCF1-like.
     
 0.656
BSL78_24832
Putative zinc finger protein.
   
  
 0.564
BSL78_28763
Uncharacterized protein.
    
   0.542
BSL78_24631
Putative serine/threonine-protein phosphatase PP1-alpha catalytic subunit-like.
    
   0.542
BSL78_15685
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.542
BSL78_12195
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.542
BSL78_08460
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.542
BSL78_07719
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.542
BSL78_06134
Uncharacterized protein.
    
   0.542
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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