STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_18154ABC transporter domain-containing protein. (639 aa)    
Predicted Functional Partners:
BSL78_06237
Putative immunoglobulin-binding protein 1 isoform X1.
    
 0.631
BSL78_07640
Putative cytochrome c oxidase assembly protein COX15-like.
    
 0.603
BSL78_14813
Putative TIP41-like protein.
     
 0.594
BSL78_15709
ATP synthase subunit gamma.
   
   0.579
BSL78_09114
Putative bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase isoform X1.
     
 0.558
BSL78_28693
Putative borealin-like.
   
 
 0.552
BSL78_07275
Putative ATP synthase subunit delta, mitochondrial.
   
   0.551
BSL78_24673
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.546
BSL78_11393
DUF3641 domain-containing protein.
  
 
  0.534
BSL78_22631
Putative FAD synthase.
     
 0.530
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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