STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_17336Putative cation channel sperm-associated protein 3-like. (391 aa)    
Predicted Functional Partners:
BSL78_06353
Putative cation channel sperm-associated protein 2-like.
  
 
0.990
BSL78_03681
Putative EF-hand calcium-binding domain-containing protein 9-like.
    
 0.969
BSL78_25097
Putative cation channel sperm-associated protein subunit delta-like.
    
 0.959
BSL78_06972
Putative cation channel sperm-associated protein subunit delta.
    
 0.959
BSL78_28574
Uncharacterized protein.
   
 0.938
BSL78_28575
Uncharacterized protein.
   
 0.938
BSL78_17701
Uncharacterized protein.
   
 0.938
BSL78_17700
Uncharacterized protein.
   
 0.938
BSL78_29608
Putative cation channel sperm-associated protein subunit gamma 1-like.
  
 
 0.923
BSL78_07647
Cation channel sperm-associated protein subunit gamma.
    
 0.907
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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