STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_16379Putative xanthine dehydrogenase/oxidase-like. (710 aa)    
Predicted Functional Partners:
BSL78_27460
Ald_Xan_dh_C2 domain-containing protein.
 
     0.950
BSL78_26664
Putative xanthine dehydrogenase/oxidase.
 
     0.948
BSL78_00302
Putative xanthine dehydrogenase isoform X1.
 
     0.945
BSL78_16378
Putative xanthine dehydrogenase/oxidase.
 
     0.944
BSL78_02714
Xanthine dehydrogenase.
 
     0.922
BSL78_21229
Putative acyl-CoA synthetase family member 3, mitochondrial.
     
 0.629
BSL78_01726
Putative beta-ureidopropionase isoform X2.
   
 
 0.611
BSL78_21388
Putative inosine-uridine preferring nucleoside hydrolase-like.
   
  0.607
BSL78_21389
Putative inosine-uridine preferring nucleoside hydrolase-like.
   
  0.607
BSL78_19639
IU_nuc_hydro domain-containing protein.
   
  0.607
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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