STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_16286Putative ribulose-phosphate 3-epimerase-like. (160 aa)    
Predicted Functional Partners:
BSL78_00811
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.912
BSL78_25025
Putative GDH/6PGL endoplasmic bifunctional protein.
  
 0.904
BSL78_20309
Putative GDH/6PGL endoplasmic bifunctional protein.
  
 0.904
BSL78_10667
Uncharacterized protein.
   
 0.902
BSL78_11515
TRANSKETOLASE_1 domain-containing protein.
  
 0.893
BSL78_11514
Transketolase-like protein 2.
  
 0.893
BSL78_24174
Uncharacterized protein.
  
 0.880
BSL78_13860
Putative ribose-5-phosphate isomerase-like isoform X2.
  
 0.880
BSL78_15405
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.876
BSL78_13760
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.876
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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